Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMNKSRLGRGRHGKTRHVLLALIGILAISICLLGGFIAFKIYQQKSFEQKIESLKKEKDDQLSEGNQKEHFRQGQAEVIAYYPLQGEKVISSVRELINQDVKDKLESKDNLVFYYTEQEESGLKGVVNRNVTKQIYDLVAFKIEETEKTSLGKVHLTEDGQPFTLDQLFSDASKAKEQLIKELTSFIEDKKIEQDQSEQIVKNFSDQDLSAWNFDYKDSQIILYPSPVVENLEEIALPVSAFFDVIQSSYLLEKDAALYQSYFDKKHQKVVALTFDDGPNPATTPQVLETLAKYDIKATFFVLGKNVSGNEDLVKRIKSEGHVVGNHSWSHPILSQLSLDEAKKQITDTEDVLTKVLGSSSKLMRPPYGAITDDIRNSL---DLSFIMWDVDSLDWKSKNEASILTEIQHQVAN--GSIVLMHDIHSPTVNALPRVIEYLKNQGYTFVTIPEMLNTRLKAHELYYSRDE
5JP6 Chain:A ((168-362))--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RKEVVLTFDDGPHGLYTDAILRALKEVNAKAMFFATGKSVRTNPEALKRVAADGHVIGSHSIT------LTFDEAAAEVRGGHQAVFDVLGWVDPVFRF-YGETSKDLKAFLKTKSTGEFAWNIESDDWRTQSNEQLLARVLANVESQGRGIVLFHDIQRRTAEIMPQFLRELYNRGYSVVLL-------------------


General information:
TITO was launched using:
RESULT:

Template: 5JP6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 869 -41135 -47.34 -240.55
target 2D structure prediction score : 0.78
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : -47.34
2D Compatibility (Sec. Struct. Predict.) : 0.78
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.521

(partial model without unconserved sides chains):
PDB file : Tito_5JP6.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5JP6-query.scw
PDB file : Tito_Scwrl_5JP6.pdb: