Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNQNDKRKMMKGLYIVPLAAATLLLGACATTVKPTYVSPTQYQSLSCQQLQSEYNRIQQYIDNGVQTPKSTGMGVGLGLGGGWGRGGWGFGPSISVNMGQSSSTKNTELSRVLGQQEAIVQAAQFKNCPIIVRKKTN
4WJ9 Chain:A ((348-423))--------------------------------------------------KEQYDKILDLIESG----KKEGAKLECG-GGPWGNKGYFVQPTVFSNVTDEMRIAKEE---IFG---PVQQIMKFKSLDDVIKRANN


General information:
TITO was launched using:
RESULT:

Template: 4WJ9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 249 -12665 -50.86 -166.64
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : -50.86
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.121

(partial model without unconserved sides chains):
PDB file : Tito_4WJ9.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4WJ9-query.scw
PDB file : Tito_Scwrl_4WJ9.pdb: