Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMYKDIKVDPAQLEAALDARLKIRAGFDKPTAGMAAGMTQVNMISVPRDWAYDFLLYAHRNPQSCPVLDVLEEGIYATKLAADSDIRTDFPRYRIWKDGEMVDEVTDAREIYNAHPDLVTFLIGCSFSFETALQEAGIEVRHIHDDTNVPMYLSNIKCEPAGRISGNMVVSMRPIPSHQISEAVKITAR-----MPSVHGAPVHIGHPESLGIKDVNKPDFGDASRIEAGEIPVFWACGVTPQAAVINSKIPFAISHAPGYMFITDIPDRAWMG
1T0O Chain:A ((17-123))---------------------------------------------------------------------------------------------------------NSWNAYHCDIDESKFLSAAELIVSSGLLDAGYNYVNIDDCWSMK----------DGRVDGHIAPNATRFPDGIDGLAKKVHALGLKLGIYSTAGTATCAGYPASLGYEDVDAADFAD---------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1T0O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 404 -16302 -40.35 -159.82
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain A : 0.58

3D Compatibility (PKB) : -40.35
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.58
QMean score : 0.180

(partial model without unconserved sides chains):
PDB file : Tito_1T0O.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1T0O-query.scw
PDB file : Tito_Scwrl_1T0O.pdb: