Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKSAFKRFVQQSPSTVKDNVFAVVAYCPINNLANADLGYEWQYNASRNDSNTGNLNGVSYSAGP-------QLTASKE-----IAEKFPMYLQTLNLKLPNGQQLT-----AENMPDQIKEQIKSEIERQLAKGTPVPNFGENFVSSKATLVNDWLKHDGSKVTEIDYQKFLNYVAANQALKTVVAFDAVGVNGNTAISGETNLFGDSQNEYNNFTQWSWDHNSKTADGSGQDDTGLSWENYLNSNSSTANLLKDQLKMVNPIAYLNTTTD-TAPYWYIRHGVLDRDTSFAMQMILYYAVTNDPKVKDTNFKLPYLTGHAGNYDVQEAFKWINEKLNTTQ
3WA7 Chain:A ((191-465))-----------APAT--DDIFAVSAYCPIHNLEHADMAYEWQFNGINDWHRYQPVAGTTKNGRPKFEPVSGQLTVEEQALSLALKAQFSTYLNQLQLTASDGTHLTLNEAGMGSFRDVVRQLLISSAQTAFDQGTDIHKYAGFVVT-------------GNQVTDLDLSAYLKSLTRM---KAVPAFDQLDLT-----SPENNLFGDATAKAKHFTALAQTRSTVTA------------------QLADAEL----IQAINPLSYLTTTSSQVAKHWRIRHGAADRDTSFAIPIILAIMLENHGYGID--FALPWDIPHSGDYDLGDLFSWID-------


General information:
TITO was launched using:
RESULT:

Template: 3WA7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1175 31615 26.91 123.01
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain A : 0.76

3D Compatibility (PKB) : 26.91
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.76
QMean score : 0.401

(partial model without unconserved sides chains):
PDB file : Tito_3WA7.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3WA7-query.scw
PDB file : Tito_Scwrl_3WA7.pdb: