Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSNIYDSANQIEREIRELPEFKALKEAYEKVQANEEAHKLFKDFQAMQIELQEKQMSGQEFSDEDAMKAQEMAVKIQSEEVINDLMQKEQGFSTIINDLNRIIMTPVRDLYSE
5JN5 Chain:A ((453-529))---------------------------YEEVEA-EGANKMMKDLEALMFD---RSFVGKQFSANDKVYTVEKADNFEYSDPVDGSISRNQGLRLIFTDGSRIVF---------


General information:
TITO was launched using:
RESULT:

Template: 5JN5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 182 -8659 -47.57 -118.61
target 2D structure prediction score : 0.30
Monomeric hydrophicity matching model chain A : 0.74

3D Compatibility (PKB) : -47.57
2D Compatibility (Sec. Struct. Predict.) : 0.30
1D Compatibility (Hydrophobicity) : 0.74
QMean score : 0.309

(partial model without unconserved sides chains):
PDB file : Tito_5JN5.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5JN5-query.scw
PDB file : Tito_Scwrl_5JN5.pdb: