Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMADSSKVTLSRASPERLVHHHRVRCAALEGETHAPYEVEAEPTQVDSSHRHYLHYGNAAHIGVHWHSSDAVHGGYSEPSAAGELTAESRETGAVNAAPAPTTSSSTSSPTSASTAARTRLSLSHLSPRTAGEGQPASLTHNPPAVHADPAARPAAPMASTGANGCGHPAVSASAEGRLNHVHATGEAGAPSSASSHSTGLPAPTAAPPKDASTTTAAKNHPLASATTHARTGFSNGRLPSHPEPAASTAAGTTRPPSHPQLPLSHPTTSSAAAAAAATFSSGAVAKEGGTNGAGASTSDGADPYARPAIALSVHLLDLYKMVNARYCAQRRLESPGPKYNSGYDDKDGHYLFLPGEVIFQRYIAQEVLGKGSFGTVIRGFDQKRSEAVAMKITRRGSSFRSQAKLELDILLRLNE-NPALNHLVVRLLKVFEWQGHLVLVFELLSFNLYQLIKCTRFNGVSLDLVRKFAYQLTHTLLQL---ELQKPHPIIHCDLKPENILLRNQNRSGIRLIDFGSACYTAKRFHRYIQSRFYRSPEVILFLDYGTPIDRWSLACVLVEMHTGVPLFDGRTEAAQLAKIEATLGPIPAGMVAGSPKANRFYYGNATSGFQLKEPI--------PERRTLESVIGVTTGGPRGRRLNTPGHDEKAYREFHDFISRFLRYQPEERMSCRDALQHPFLRPLYTSDLQQQKDREVAQPISAPQPPQKQQHTQCSQNSKPQPQSPKNINATTTKMLTSTERSRASALPPAE
2VX3 Chain:A ((49-377))------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPEL----SIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHILDQAPKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSFFK----------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2VX3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1503 -70076 -46.62 -221.06
target 2D structure prediction score : 0.54
Monomeric hydrophicity matching model chain A : 0.69

3D Compatibility (PKB) : -46.62
2D Compatibility (Sec. Struct. Predict.) : 0.54
1D Compatibility (Hydrophobicity) : 0.69
QMean score : 0.491

(partial model without unconserved sides chains):
PDB file : Tito_2VX3.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2VX3-query.scw
PDB file : Tito_Scwrl_2VX3.pdb: