Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceGTGCNVEILNQNQVSVGSGCARINSVTNISDNQGRRWGVNANSSCGLSTTQTLPSGWSLTHNGFCNA
5LSZ Chain:A ((195-249))----NDEIIDATQ---KGNCSRFMNHSCEPNCETQKWTVNGQLRVGFFTTKLVPSGSELTFD-----


General information:
TITO was launched using:
RESULT:

Template: 5LSZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 124 857 6.91 15.57
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain A : 0.72

3D Compatibility (PKB) : 6.91
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.72
QMean score : 0.115

(partial model without unconserved sides chains):
PDB file : Tito_5LSZ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5LSZ-query.scw
PDB file : Tito_Scwrl_5LSZ.pdb: