Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKKTESHKAKSK 3AFA Chain:C ((15-122)) -----------RAKAKTRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPK----------

General information: TITO was launched using: RESULT: Template: 3AFA.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 290 -33896 -116.88 -313.85 target 2D structure prediction score : 0.75 Monomeric hydrophicity matching model chain C : 0.95 3D Compatibility (PKB) : -116.88 2D Compatibility (Sec. Struct. Predict.) : 0.75 1D Compatibility (Hydrophobicity) : 0.95 QMean score : 0.639

(partial model without unconserved sides chains): PDB file : Tito_3AFA.pdb: (Unconserved sides chains are recalculated) : Sequence: align-3AFA-query.scw PDB file : Tito_Scwrl_3AFA.pdb: