Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIMLQKIYEQMANFYDSIEEEYGPTFGDNFDWEHVHFKFLIYYLVRYGIGCRKDFIVYHYRVAYRLYLEKLVMNRGFISC
5NXB Chain:A ((127-153))-------------------------LGKGFSWPYVNLQLTAYYVVRWILGAK----------------------------


General information:
TITO was launched using:
RESULT:

Template: 5NXB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 29 -4702 -162.12 -174.13
target 2D structure prediction score : 0.81
Monomeric hydrophicity matching model chain A : 0.57

3D Compatibility (PKB) : -162.12
2D Compatibility (Sec. Struct. Predict.) : 0.81
1D Compatibility (Hydrophobicity) : 0.57
QMean score : 0.168

(partial model without unconserved sides chains):
PDB file : Tito_5NXB.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5NXB-query.scw
PDB file : Tito_Scwrl_5NXB.pdb: