Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDRNIDQELVSIIIPTHNRYESLIRAVKSCLHQSYKNIEVIIIDDNYSNVNLRNKIIHQFGYTNHRIKLILSNEDLGATNARNIGIKNSRGKYISFLDDDDEYMPDRILKLMACFKKSRMKNLALVYSYGIIIYPNGTREEEKTDFVGNPLFVQMVHNIAGTSFWLCKKEVLELINGFEKIDSHQDGVVLLKLLAQGYQIDIVREFLVNYYAHSKENGITGVTQKTINADEEYYNYCRKYFNLLSFNERILVTKKYYSLNIKRLLLIGDKCKALKVIKKAREEKIFNEFLFLKYMLLYNFSFFYCIYDNYVQLKFRK
3BCV Chain:A ((7-110))---------VSVIVPIYNVEKYLDQCVQALLAQTLSDIEIILIDDESPD-NCP-KICDDYAAQYPNIKVI-HKKNAGLGMACNSGLDVATGEYVAF-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3BCV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 364 -58205 -159.90 -692.91
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain A : 0.57

3D Compatibility (PKB) : -159.90
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.57
QMean score : 0.527

(partial model without unconserved sides chains):
PDB file : Tito_3BCV.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3BCV-query.scw
PDB file : Tito_Scwrl_3BCV.pdb: