Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTTNRKDEHILYA----LEQKSSYNSFDEVELIHSSLPLYNLDEIDLSTEFAGRKWDFPFYINAMTGGSNKGREINQKLAQVAETCGILFVTGSYSAAL-KNPTDDSFS-VKSSHPNLLLGTNIGLDKPVE-LGLQTVEEMNPVL----LQVHVNVMQELLMPEGERKFRSWQ-SHLADYSKQIPVPIVLKEVGFGMDAKTIERAYEFGVRTVDLSGRGGTSFAYIENRRSGQR---------DYLNQWGQSTMQALLNAQEWKDKVELLVSGGVRNPLDMIKCLVFGAKAVGLSRTVLELVETYTVEEVIGIVQGWKA---DLRLIMCSLNCATIADLQKVDYLLYGKLKEANDQMKKA
3B03 Chain:A ((5-349))--VNRKVEHVEIAAFENVDGLSSSTFLNDVILVHQGFPGISFSEINTKTKFFRKEISVPVMVTGMTGGRNELGRINKIIAEVAEKFGIPMGVGSQRVAIEKAEARESFAIVRKVAPTIPIIANLGMPQLVKGYGLKEFQDAIQMIEADAIAVHLNPAQEVFQPEGEPEYQIYALEKLRDISKELSVPIIVKESGNGISMETAKLLYSYGIKNFDTSGQGGTNWIAIEMIRDIRRGNWKAESAKNFLD-WGVPTAASIMEVRYSVPDSFLVGSGGIRSGLDAAKAIALGADIAGMALPVLK----SAIEGKESLEQFFRKIIFELKAAMMLTGSKDVDALKKTSIVILGKLKE--------


General information:
TITO was launched using:
RESULT:

Template: 3B03.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1929 32342 16.77 100.75
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain A : 0.78

3D Compatibility (PKB) : 16.77
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.78
QMean score : 0.472

(partial model without unconserved sides chains):
PDB file : Tito_3B03.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3B03-query.scw
PDB file : Tito_Scwrl_3B03.pdb: