Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEFFICNLVRVVQSPRFYMSLFLTLLCMSLGNFLAFNGIYKIEGLSIFFAASSIRGFSPISLVAALICTLPYSSQIIEDAESHFLTAQLCRISKKRYLAIVGSTAIISSFLVFFLPYLLLLGINLLVTPYQEIYIGDYSGALKELFDSNQLLYSLVTTLWYGVWGAVFS-IFGLASALLVKKKLGAIFIPVAYMMVGGILWAILGLSYLEPVTTLALGYQKDISLSLVSAHLAFILFVSCLVVYGTFFLHSEDYV
5EZ4 Chain:C ((420-478))-----------------------------------------------------------------------------------------------------------------------------------------------EGFETEQEAIQLANDSIYGLAGAVFSKDIGKAQRVANKLKLGTVWINDFHMLFAQAPWG-----------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5EZ4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 165 -18743 -113.59 -323.15
target 2D structure prediction score : 0.36
Monomeric hydrophicity matching model chain C : 0.43

3D Compatibility (PKB) : -113.59
2D Compatibility (Sec. Struct. Predict.) : 0.36
1D Compatibility (Hydrophobicity) : 0.43
QMean score : 0.234

(partial model without unconserved sides chains):
PDB file : Tito_5EZ4.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5EZ4-query.scw
PDB file : Tito_Scwrl_5EZ4.pdb: