Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMALLAEFYSKEGNMNTNLASFIVGLIIDENDRFYFVQKDGQTYALAKEEGQHTVGDTVKGFAYTDMKQKLRLTTLEVTATQDQFGWGRVTEVRKDLGVFVDTGLPDKEIVVSLDILPE----LKELWPKKGDQLYIRL-EVDK-KDRIWGLLAYQEDFQRLARPA-YNNMQNQNWPAIVYRLKLSGTFVYLPENNMLGFIHPSERYAEPRLGQVLDARVIGFREVDRTLNLSLKPRSFEMLENDAQMILTYLESNGGFMTLNDKSSPDDIKATFGISKGQFKKALGGLMKAGKIKQDQFGTELI
4NNG Chain:A ((290-413))-----------------------------------------------------------------------------THAIGQIVAGKVTKLV-PFGAFVRVEE-GIEGLVHISELAERHVEVPDQVVAVGDDAMVKVIDIDLERRRISLSLKQANED-YTEEFDPAKYGMADSYDEQGNYIFPEGFDAETN-EWLEGFEKQRAE---------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4NNG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 450 -3745 -8.32 -32.01
target 2D structure prediction score : 0.42
Monomeric hydrophicity matching model chain A : 0.57

3D Compatibility (PKB) : -8.32
2D Compatibility (Sec. Struct. Predict.) : 0.42
1D Compatibility (Hydrophobicity) : 0.57
QMean score : 0.198

(partial model without unconserved sides chains):
PDB file : Tito_4NNG.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4NNG-query.scw
PDB file : Tito_Scwrl_4NNG.pdb: