Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTAIVELKNATKIVKNGFDEEKIILNDVSLEIFEQDFITILGGNGAGKSTLFNTIAGTISLTSGTIRILGEDVTKFSPEKRAKY-LSRVFQDPKMGTAPRMTVAENLLIAKFRGEKRGLFPRRLASYKDKFQATIEKVGNGLE----KHL-NTPIEFLSGGQRQALSLLMATLKRPELLLLDEHTAALDPKTSVALMELTDEFVKKDQLTALMITHHMEDALKYGNRLIVMKEGRVIQDLKQEEKAKMKISDYYQLFE
1G9X Chain:A ((23-247))------------------------LDGVSISVCKGDVTLIIGPNGSGKSTLINVITGFLKADEGRVYFENKDITNKEPAELYHYGIVRTFQTPQ--PLKEMTVLENLLIGEINPGESPLNSLFYKKWIPKEEEMVEKAFKILEFLKLSHLYDRKAGELSGGQMKLVEIGRALMTNPKMIVMDEPIAGVAPGLAHDIFNHVLE-LKAKGITFLIIEHRLDIVLNYIDHLYVMFNGQIIAEGRGEEEIKNVLSD------


General information:
TITO was launched using:
RESULT:

Template: 1G9X.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1087 7762 7.14 35.44
target 2D structure prediction score : 0.49
Monomeric hydrophicity matching model chain A : 0.72

3D Compatibility (PKB) : 7.14
2D Compatibility (Sec. Struct. Predict.) : 0.49
1D Compatibility (Hydrophobicity) : 0.72
QMean score : 0.446

(partial model without unconserved sides chains):
PDB file : Tito_1G9X.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1G9X-query.scw
PDB file : Tito_Scwrl_1G9X.pdb: