Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMADRGLLIVFSGPSGVGKGTVRREIFESSENQFQYSVSMTTRAQRPGEVDGVDYFFRTREEFEELIRQGQMLEYAEYVGNYY--GTPLTYVNETLDKGIDVFLEIEVQGALQVKKKVPDAVFIFLTPPDLDELQDRLVGRGTDSAEVIAQRIEKAKEEIALMREYDYAIVNDQV-SLAAERVKCVIEAEHFCVDRVIGHYQEMLPKSPTTR
1S4Q Chain:A ((23-203))----GRVVVLSGPSAVGKSTVVRCLRERIPN-LHFSVSATTRAPRPGEVDGVDYHFIDPTRFQQLIDQGELLEWAEIHGGLHRSGTLAQPVRAAAATGVPVLIEVDLAGARAIKKTMPEAVTVFLAPPSWQDLQARLIGRGTETADVIQRRLDTARIELAAQGDFDKVVVNRRLESACAELVSLLV-------------------------


General information:
TITO was launched using:
RESULT:

Template: 1S4Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 745 -15571 -20.90 -87.48
target 2D structure prediction score : 0.72
Monomeric hydrophicity matching model chain A : 0.80

3D Compatibility (PKB) : -20.90
2D Compatibility (Sec. Struct. Predict.) : 0.72
1D Compatibility (Hydrophobicity) : 0.80
QMean score : 0.606

(partial model without unconserved sides chains):
PDB file : Tito_1S4Q.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1S4Q-query.scw
PDB file : Tito_Scwrl_1S4Q.pdb: