Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAEFKFTDLVEPVAVDKKTALRITVLGGGSFGTAMANLAARN-------GCDTMIWIRDA-----ETAEEINKTHINKRYLPDFTLESSLRAVSDLEQAVCDRDIILVAIPSHSFRDVLKQIAPYITAQAV-VSLTKGIEA--KTFSFMSDIIREELPEVPYGVLSGPNLAKEIMAGMPSGTVIASDSELVRYAVQHALHSALFRVFGSDDVHGVELGGALKNIYAVAMGIGAAYKIGENTKSMILTRALAEMSRFA---VKQGANPLTFLGLSGVGDLFATCNSPLSRNYQIGYALG-SGKTLEQASKEL--GQTAEGINTIVQVRG--KAQELDVYMPITNALYEVIFEGAPPLNIALSLMKNGHRSDVEFVLPHHEV
2PLA Chain:A ((6-336))--------------------LKVCIVGSGNWGSAVAKIIGNNVKKLQKFASTVKMWVFEETVNGRKLTDIINNDHENVKYLPGHKLPENVVAMSNLSEAVQDADLLVFVIPHQFIHRICDEITGRVPKKALGITLIKGIDEGPEGLKLISDIIREKMG-IDISVLMGANIANEVAAEKFCETTIGSKVMENGLLFKELLQTPNFRITVVDDADTVELCGALKNIVAVGAGFCDGLRCGDNTKAAVIRLGLMEMIAFARIFCKGQVSTATFLESCGVADLITTCYG--GRNRRVAEAFARTGKTIEELEKEMLNGQKLQGPQTSAEVYRILKQKGLLDKFPLFTAVYQICYESRP--------------------------


General information:
TITO was launched using:
RESULT:

Template: 2PLA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1751 -9781 -5.59 -31.76
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain A : 0.76

3D Compatibility (PKB) : -5.59
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.76
QMean score : 0.511

(partial model without unconserved sides chains):
PDB file : Tito_2PLA.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2PLA-query.scw
PDB file : Tito_Scwrl_2PLA.pdb: