Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLIHYPVYFFFELIQASCNEYIASGSNKEDIMLLNRKHSLVSCFDLELLETHPVKIKNSKVKQKNFITVSLEFSFKKIPPIF
3MKR Chain:B ((927-951))-----------------PVDHILAGSFETAMRLLHDQVGVTQ----------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3MKR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 42 -3528 -84.00 -141.12
target 2D structure prediction score : 0.44
Monomeric hydrophicity matching model chain B : 0.51

3D Compatibility (PKB) : -84.00
2D Compatibility (Sec. Struct. Predict.) : 0.44
1D Compatibility (Hydrophobicity) : 0.51
QMean score : 0.521

(partial model without unconserved sides chains):
PDB file : Tito_3MKR.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3MKR-query.scw
PDB file : Tito_Scwrl_3MKR.pdb: