Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMYFMSFKDELAAQVAQRRTFAIISHPDAGKTTMTEKLLLWGKAIQVAGMVKSRKSDRAATSDWMEMEKERGISITTSVMQFPYKGHTINLLDTPGHEDFSEDTYRTLTAVDSALMVIDGAKGVEERTIKLMEVCRMRDTPIISFVNKMDREIREPLELLDEIENVLNIRCVPITWPLGMGRDFAGVYNILEDKLYVYKAGFGSTITDIEVRDGY-DHA-DIREKVGELAWASFEESLELVQMANEPLDRGLFLQG--------KQTPVLFGTALGNFGVDHVLDAFMHWAPEP------KAHPTQERVVEAKEE---GFSGFVFKIQANMDPKHRDRIAFMRICSGKYEKGLKMNHVRISKEVRISDALTFLAGEREHLEEAWPGD---IIGLHNHGTIQIGDTFTSGENLHFTGIPHFAPEMFRRVRLKDPLKSKQ--LQKGLKELSEEGAT-QVFMPQISNDLIVGAVGVLQFDVVAYRLKEEYKVDCVYEPVSVNTVRWIHCDDEKILNEFKKKAHDQLSIDGGGHLTYLAPSRVNLQIMQERWPDIEFRSTREH
2BM1 Chain:A ((13-474))-----------------RNIVIAAHIDAGKTTTTERILYYTGRI-----------------------------ITAAVTTCFWKDHRINIIDTPGHVDFTIEVERSMRVLDGAIVVFDSSQGVEPQSETVWRQAEKYKVPRIAFANKMDKTGADLWLVIRTMQERLGARPVVMQLPIGREDTFSGIIDVLRMKAYTYGNDLGTDIREIPIPEEYLDQAREYHEKLVEVA-ADFDENIMLKYLEGEEPTEEELVAAIRKGTIDLKITPVFLGSALKNKGVQLLLDAVVDYLPSPLDIPPIKGTTPEGEVVEIHPDPNGPLAALAFKIMA--DP-YVGRLTFIRVYSGTLTSGSYVYNTTKGRKERVARLLRMHANHREEVEELKAGDLGAVVGLKETIT---GDTLVGEDAPRVILESIEVPEPVIDVAIEPKTKADQEKLSQALARLAEEDPTFRVSTHPETGQTIISGMGELHLEIIVDRLKREFKVDA--------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2BM1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2183 -49655 -22.75 -120.52
target 2D structure prediction score : 0.54
Monomeric hydrophicity matching model chain A : 0.73

3D Compatibility (PKB) : -22.75
2D Compatibility (Sec. Struct. Predict.) : 0.54
1D Compatibility (Hydrophobicity) : 0.73
QMean score : 0.473

(partial model without unconserved sides chains):
PDB file : Tito_2BM1.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2BM1-query.scw
PDB file : Tito_Scwrl_2BM1.pdb: