Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMMKLNALLCSAVLATSMVTVAHADNTTHVAAASALGSIAGTAIGKSMGGTNGGYIGAALGAAGGSALGNKISKDRDAD--------RSSKYWKKNTVIIVTNYRDEIGLKTPSGVFL
4NEA Chain:A ((228-289))----------------------------------------------------GTINLILGA--GSEVGDVMSGHKEVDLVSFTGGIETGKHIMKNAANNVTNIALELGGKNPNIIF-


General information:
TITO was launched using:
RESULT:

Template: 4NEA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 153 8626 56.38 159.73
target 2D structure prediction score : 0.33
Monomeric hydrophicity matching model chain A : 0.57

3D Compatibility (PKB) : 56.38
2D Compatibility (Sec. Struct. Predict.) : 0.33
1D Compatibility (Hydrophobicity) : 0.57
QMean score : 0.218

(partial model without unconserved sides chains):
PDB file : Tito_4NEA.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4NEA-query.scw
PDB file : Tito_Scwrl_4NEA.pdb: