Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNHVMCVMSYSLKMVLNHEEDTQRLAQALAQHVQAGVIYLIGDLGAGKTTLTRYFLQALGHKGSVKSPTYTLVEPYKINNKEIFHFDLYRLNDPYELELMGIRDYLDIQDALFLFEWPSKGGDEIPEADIVIDIQKSDDELNRFVTLTLPTEHLYQTLQEQLHD
5FHF Chain:A ((24-55))-------------------------------------VFVTGKAGSGKTTFLKYLIEKSGKNCIVAAPT-----------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5FHF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 29 -4432 -152.83 -138.50
target 2D structure prediction score : 0.72
Monomeric hydrophicity matching model chain A : 0.58

3D Compatibility (PKB) : -152.83
2D Compatibility (Sec. Struct. Predict.) : 0.72
1D Compatibility (Hydrophobicity) : 0.58
QMean score : 0.692

(partial model without unconserved sides chains):
PDB file : Tito_5FHF.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5FHF-query.scw
PDB file : Tito_Scwrl_5FHF.pdb: