Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKMNKQPQNSALVVVDVQNGFTPGGNLAVADADTIIPTINQLAGCFENVVLTQDWHPDNHISFAANHPGKQPFETIELDYGSQVLWPKHCIQGTHDAEFHPDLNIPTAQLIIRKGFHAHIDSYSAFMEADHTTMTGLTGYLKERGIDTVYVVGIATDFCVAWTALDAVKQGFKTLVIEDACKG-IDLNGSLEQAWQTMQQQGVIRIQSTDLLNEC
3EEF Chain:A ((4-152))----------ALVVVDMVNEFI-HGRLATPEAMKTVGPARKVIETFRRSGLPVVYVNDSH------YPDDPEIR----------IWGRHSMKGDDGSEVIDEIRPSAGDYVLEK--HA----YSGFY------GTNLDMILRANGIDTVVLIGLDADICVRHTAADALYRNYRIIVVEDAVAARIDPN---------------------------


General information:
TITO was launched using:
RESULT:

Template: 3EEF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 789 -106468 -134.94 -719.38
target 2D structure prediction score : 0.67
Monomeric hydrophicity matching model chain A : 0.75

3D Compatibility (PKB) : -134.94
2D Compatibility (Sec. Struct. Predict.) : 0.67
1D Compatibility (Hydrophobicity) : 0.75
QMean score : 0.345

(partial model without unconserved sides chains):
PDB file : Tito_3EEF.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3EEF-query.scw
PDB file : Tito_Scwrl_3EEF.pdb: