Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLQPKRTKFRKVHKGRNTGLAHRGSTVSFGSIAIKATERGRMTARQIEAARRAISRRIKRGGKIFIRVFPDKPITEKPLEVRMGNGKGNVEYWVCEIKPGKILYEIEGVNEDLAREAFALAAAKLPFKTTIVTRTVM
5ADY Chain:M ((1-136))MLQPKRTKFRKMHKGRNRGLAQ-GTDVSFGSFGLKAVGRGRLTARQIEAARRAMTRAVKRQGKIWIRVFPDKPITEKPLAVRMGKGKGNVEYWVALIQPGKVLYEMDGVPEELAREAFKLAAAKLPIKTTFVTKTVM


General information:
TITO was launched using:
RESULT:

Template: 5ADY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain M - contact count / total energy / energy per contact / energy per residue : 573 -44406 -77.50 -326.51
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain M : 0.96

3D Compatibility (PKB) : -77.50
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.96
QMean score : 0.658

(partial model without unconserved sides chains):
PDB file : Tito_5ADY.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5ADY-query.scw
PDB file : Tito_Scwrl_5ADY.pdb: