Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MLFYKNILTLSILAAISIPVFAAENENVEKLETIRIKAHPLEQTSKDFAVADTVVDQKHLTEGAAT-IGDALNSEVGIYANQFGAGS--SRPVIRGQDGPRVKVLQNSSENVDVSTLSPDHAVTVDPV-LAKQVEVIRGPSTLLFGAGTVGGLVNVIDNKIPTQIPENGYEGQVGLRYNTGSDEKLASAGVTVGLGSQVALRIEGLTRDANNYIAPNYIHEGEKERRVDNTFAQGDSVNVGLSWVYDRGYTGISYSNRRDQYGLPGHSHEYETCH---IHDLS-LHCGDHDHEGHSDEEAHDHEHEHGGPWID---LKSERYDFKTELNDPFAGFQKLRAQASYTDYQHDE--IEEGTIATRFQNKGYDGRIELVHNPIADWEGVIGTQLGQQKLNLTGEEAFMAPTTTKKWS-VFALEHKQWKDVHFELSARADQQEIDVDDNSKQDFDGSAFSYAGAANWEFAPNYKLSFVASH--QERLPLAQELYANGGHFATNTYELGNDQLSKEKSNNVELGLHFDNDKLDYHLHVYHNWFDDYIYAQTLDRYKDFRLVQYTQDKARFYGAEGEIGYQITPMYKISAFGDYVRGKIDAEGNAPRIPAGRLGTKVDADFG--DGFSGSAEYYHVFNQDK-IAAYETET---EGYNMLNLGVAYSGQYGAKTDYRVYLKANNLLD---DTVYQHASFLSNIPQVGRNFTVGVDFSF 2GSK Chain:A ((2-590)) -------------------------------DTLVVTANRFEQPRSTVLAPTTVVTRQDIDRWQSTSVNDVLRRLPGVDITQNGGSGQLSSIFIRGTNASHVLVLIDGVR-LNLAGVSGSADLSQFPIALVQRVEYIRGPRSAVYGSDAIGGVVNII-----TTRDEPGTE-------------------ISAGWGSN----------SYQNYDVSTQQQLGDKTR-----------VTLLGDYAHTHGYDVVAYGNTGTQAQTDNDGFLSKTLYGALEHNFTDAWSGFVRGYGYDNRTNYDAYYSPGSPLLDTRKLYSQSWDAGLRYNGELIKSQLITSYSHSKDYNYDPHYGRYDSSATLDEMKQY--TVQWANNVIVG-HGSIGAGVDWQKQTTTPGTGYVEDGYDQRNTGIYLTGLQQVGDFTFEGAARSD-------DNSQF---GRHGTWQTSAGWEFIEGYR--FIASYGTSYKAPNLGQLY---GFY-------GNPNLDPEKSKQWEGAFEGLTAGVNWRISGYRNDVSDLI------DYDDHTLKYYNEGKARIKGVEATANFDTGPLTHTVSY-DYVDAR-NAITDTPLLRRAKQQVKYQLDWQLYDFDWGITYQYLGTRYDKDYSSYPYQTVKMGGVSLWDLAVAYP----VTSHLTVRGKIANLFDKDYETVYGYQT-------AGREYTLSGSYTF

General information: TITO was launched using: RESULT: Template: 2GSK.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 3324 119474 35.94 211.83 target 2D structure prediction score : 0.48 Monomeric hydrophicity matching model chain A : 0.70 3D Compatibility (PKB) : 35.94 2D Compatibility (Sec. Struct. Predict.) : 0.48 1D Compatibility (Hydrophobicity) : 0.70 QMean score : 0.171

(partial model without unconserved sides chains): PDB file : Tito_2GSK.pdb: (Unconserved sides chains are recalculated) : Sequence: align-2GSK-query.scw PDB file : Tito_Scwrl_2GSK.pdb: