Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKSFKVALAQFSPHIGNIDSNTQKMIEQANQAKKQDADLIIFPELSVIGYPAEDLLLRPNLNKRMQKAFAQL-SEVKDIVMVFGFVNQTEDGQR-YNSAAVMKDGQVLGVFNKHNLPNYGVFDEKRYFQKGHQH----------------LVF---EYLGHKFGVLICEDIWSINTVKQLSQLNVDTVLV-LNSSPYEVGKPQHRKQTLSELAKQLHLNTVYVNQVGGQD--DLIFDGTSFVSNQNGEIALQAPSF-----------------KEDLYIAEFDR------------------------DTKLYKVVESAPAL--------ETFAEIYQGLVMATRDYVERSGFPGVILGLSGGIDSALTLAIAVDAIGAE-----RVQAVMMPYTYTSQISVEDAAEQARRMGVTFGIAEIHSIVNSFMQTL-YPF-FGNSPADATEENLQARARGTLLMGLSNKFGNLVLSTGNKSELSVGYCTL-YGDMVGGFAVLKDVYKTIVFELAKYRNSLSETPVIPERVITRPPSAELRPDQKDQDSLPAYDVLDAILYAYIEEDLGQADIIAKGFDKEVVEKVIRLVDRNEYKRRQGAIGPRITSRAFSRERRYPIVNGWTAND
3SEZ Chain:A ((14-541))----RVAACTHHTTIGDPAANAASVLDMARACHDDGAALAVFPELTLSGYSIEDVLLQDSLLDAVEDALLDLVTESADLLPVLVVGAPLRHRHRIYNTAVVIHRGAVLGVVPKSYLPTYREFYERRQMAPGDGERGTIRIGGADVAFGTDLLFAASDLPGFVLHVEIAEDMFVPMPPSAEAALAGATVLANLSGSPITIGRAEDRRLLARSASARCLAAYVYAAAGEGESTTDLAWDGQTMIW-ENGALLAESERFPKGVRRSVADVDTELLRSERLRMGTFDDNRRHHRELTESFRRIDFALDPPAGDIGLLREVERFPFVPADPQRLQQDCYEAYNIQVSGLEQRLRALDYPKVVIGVSGGLDSTHALIVATHAMDREGRPRSDILAFALPGF------KNNAIKLARALGVTFSEIDIGDTARLMLHTIGHPYSVGEKVYDVTFENVQAGLRTDYLFRIANQRGGIVLGTGDLSELALGWSTYGVGDQMSHYNVNAGVPKTLIQHLIRWVISAGE--------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3SEZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2288 -43196 -18.88 -101.40
target 2D structure prediction score : 0.55
Monomeric hydrophicity matching model chain A : 0.71

3D Compatibility (PKB) : -18.88
2D Compatibility (Sec. Struct. Predict.) : 0.55
1D Compatibility (Hydrophobicity) : 0.71
QMean score : 0.441

(partial model without unconserved sides chains):
PDB file : Tito_3SEZ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3SEZ-query.scw
PDB file : Tito_Scwrl_3SEZ.pdb: