Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNKPLSSRFLFKSFGMVAVCMSLAACGDKAWWSNNDEPELESQQIKRLIPSRVHDRESWAKDIDDIMKDLDIPKTKQNVCSIVAVVDQESNFVANPQVPGLGQKAVEEVSTRLNEKFEDKLGKTIGGTIAGYFEEVLRTQPSPDNNYMSQMRKVKTEKDLDLLYREIFDFMAKHYHVSALTGAAKLVGQDIGEKMNPITTLGSMQVHINYAKANKRSSMNTAALRDDLYTEYGGLYYGIHRLMVYPADYDKAIYRFADYNSGMYSSRNAAFQKMLKELTDKDISLDGDLLLYTKDGDPRATQSESEKELITVFASNNVLVTPRQIRDDLKLEKEKKFESTQTYIALTKLYKSKTGKEPLYAIMPQVVISGPKLSRDYNTNWYATRVNGRYETCMQRAKRIRL
3CT0 Chain:A ((12-52))-----------------------------------------------------SEMKVNAQYILNYLSSNGW--TKQAICGMLGNMQSESTINPGL------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3CT0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 77 -14890 -193.37 -363.16
target 2D structure prediction score : 0.80
Monomeric hydrophicity matching model chain A : 0.54

3D Compatibility (PKB) : -193.37
2D Compatibility (Sec. Struct. Predict.) : 0.80
1D Compatibility (Hydrophobicity) : 0.54
QMean score : 0.531

(partial model without unconserved sides chains):
PDB file : Tito_3CT0.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3CT0-query.scw
PDB file : Tito_Scwrl_3CT0.pdb: