Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKNKNIGCWLLLAGSSSVCAMQPLDDQSLAAATGQNGLTLGIQADQVKFNQVALIDTNGIASTS--YNSKAGLIIAGNSTNPVPGIEFIKAAVSTNPSFNIAIDTDAGGGNPFLNLAVTMGSDVNGIRLLPFSVYLAPSTSLPSPSDYALTSYAPKSIFSSGTTVNTGVKELIRSTGNLDINFVQTNKPRLNIQLGHAAQSVMVKFGGAIQSICSAASGCPITLVSDNTGATFGFKFAGTNASTGFVLDGFYAGVDPTGLTIGNIGVSSKFDASLNNVTLGNLGTQSTTTFNNLPNGSMGSFGVTGASVTDFKMKVSGF
4GIO Chain:B ((54-84))-------------------------------------------------YKVDWLDKDGFVLRDVLNEDYQALRIPAGQE-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4GIO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 25 -14 -0.54 -0.47
target 2D structure prediction score : 0.83
Monomeric hydrophicity matching model chain B : 0.47

3D Compatibility (PKB) : -0.54
2D Compatibility (Sec. Struct. Predict.) : 0.83
1D Compatibility (Hydrophobicity) : 0.47
QMean score : 0.091

(partial model without unconserved sides chains):
PDB file : Tito_4GIO.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4GIO-query.scw
PDB file : Tito_Scwrl_4GIO.pdb: