Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMNEEQELQRGLKNRHVQLISIGGAIGTGLFLGSGKSIQLAGPSILLAYLITGCICFFIMRALGELLLSNTNNHSFLDFVAEYLGKKAAFITGWTYWFCWVSIAMADLTAIGMYVRYWAPGVPQWLPELIALGLLLCLNMVAVSLFGELEFWFALIKVVAIIAFILVGAYMILTHYTTDIGTASITNLWSHGGFFPTGAKGFILAFQMVTFAFAGIELVGLVAGETENPEKVLPEA-INNIPIRIILFYLGSLFVIMAIYPWNSLNPDNSPFVEVFSEIGITIAASLINLVVLSAAASACNSAIYSTGRMLRSLAQEGSAPKKFKKLTTHHVPGNALTFSTIVIFISVILNYVMPSEVFTLVSSIATTCFLFIWSMLVYTHMKYRKSILGKKAHSFKMPLYPFSNYLVFLYMAFVCVVLFLGKDTRIALLLTPVWFLLLLLIYHMKYERKK
3OB6 Chain:A ((202-430))-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------WSFIGVESASVAAGVVKNPKRNVPIATIGGVLIAAVCYVL-STTAIMGMIPNAALRVSASPFGDAARMALGDTAGAIVSFCAAAGCLGSLGGWTLLAGQTAKAAADDGLFPPIFARVNKAGTPVAGLIIVGILMTI-FQLSSISP----GLVSSVSV-----IFTLVPYLYTCAALLLLGHGHFGKARPAYLAVTTIAFLY----CIWAVVGSGAK-EVMWSFVTLMVITAMYALNYNR--


General information:
TITO was launched using:
RESULT:

Template: 3OB6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 516 -62758 -121.62 -282.69
target 2D structure prediction score : 0.73
Monomeric hydrophicity matching model chain A : 0.55

3D Compatibility (PKB) : -121.62
2D Compatibility (Sec. Struct. Predict.) : 0.73
1D Compatibility (Hydrophobicity) : 0.55
QMean score : 0.100

(partial model without unconserved sides chains):
PDB file : Tito_3OB6.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3OB6-query.scw
PDB file : Tito_Scwrl_3OB6.pdb: