Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTIAKDMMVNDGIRARELRLIGSDGEQLGVKTKAEALNIAEQANLDLVLVAPGAKPPVARIMDYGKYRFEQQKKDREARKKQKVINVKEVRLSPTIDLNDFNTKLRNARKFLEKGDKVKASIRFKGRAITHKEIGQKVLNRLAEETADIATVEQKAKMDGRSMFLTLAPKNDSK
5LMU Chain:X ((2-166))----KEYLTNERIRAKQVRVVGPDGKQLGIMDTREALRLAQEMDLDLVLVGPNADPPVARIMDYSKWRYEQQMAEKEARK----TEVKSIKFRVKIDEHDYQTKLGHIKRFLQEGHKVKVTIMFRGREVAHPELGERILNRVTEDLKDLAVVEMKPEMLGRDMNMLLAP-----


General information:
TITO was launched using:
RESULT:

Template: 5LMU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain X - contact count / total energy / energy per contact / energy per residue : 674 -65195 -96.73 -404.94
target 2D structure prediction score : 0.72
Monomeric hydrophicity matching model chain X : 0.87

3D Compatibility (PKB) : -96.73
2D Compatibility (Sec. Struct. Predict.) : 0.72
1D Compatibility (Hydrophobicity) : 0.87
QMean score : 0.567

(partial model without unconserved sides chains):
PDB file : Tito_5LMU.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5LMU-query.scw
PDB file : Tito_Scwrl_5LMU.pdb: