Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLETAIEVLEKCAQLVTASEEWGYESVTMEKEEIEMGMLPE--DVTLPRLVMTHLYIYCAPEDGKDYVVYFITD------------ITSQREFVRGLLVEGRLVWSQIGGTNE
2NAS Chain:A ((1-110))MIPS---FAPGTLVWLKQDRFPWWPGFVMDPDEVRDITLPEGSDVWVCCLPRDSLTLSAANSEDEGQIRYFLPDRDEGMMEEGKLDASCAVAIEEAIQLYEEQLKAQAGGTNE


General information:
TITO was launched using:
RESULT:

Template: 2NAS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 368 -6307 -17.14 -65.70
target 2D structure prediction score : 0.48
Monomeric hydrophicity matching model chain A : 0.70

3D Compatibility (PKB) : -17.14
2D Compatibility (Sec. Struct. Predict.) : 0.48
1D Compatibility (Hydrophobicity) : 0.70
QMean score : -0.006

(partial model without unconserved sides chains):
PDB file : Tito_2NAS.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2NAS-query.scw
PDB file : Tito_Scwrl_2NAS.pdb: