Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGYDKHQARTSGWRVPENNLIFVSLLGGGLGGLISRKVFHHKTRKKKFTIGFAAGVLVDLILIYFFH
4GXX Chain:B ((12-31))--------------------------GGWTGMIDGWYGYHHQNEQG---------------------


General information:
TITO was launched using:
RESULT:

Template: 4GXX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 12 -464 -38.63 -23.18
target 2D structure prediction score : 0.25
Monomeric hydrophicity matching model chain B : 0.48

3D Compatibility (PKB) : -38.63
2D Compatibility (Sec. Struct. Predict.) : 0.25
1D Compatibility (Hydrophobicity) : 0.48
QMean score : 0.370

(partial model without unconserved sides chains):
PDB file : Tito_4GXX.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4GXX-query.scw
PDB file : Tito_Scwrl_4GXX.pdb: