Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKMKKYKIRKSGNSDVTTIPPEVKEFMGVQTGDAISYVFQSDGSVRMIKAQEEPDIDSLVDSIMNQYEDALKDLVDL
5L6L Chain:D ((7-52))-HARATGKTFRSGNSEAVRLPRDLA----FGADVELTLIRS-GDVLTIYPSK--------------------------


General information:
TITO was launched using:
RESULT:

Template: 5L6L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 81 -9059 -111.84 -196.93
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain D : 0.62

3D Compatibility (PKB) : -111.84
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.516

(partial model without unconserved sides chains):
PDB file : Tito_5L6L.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5L6L-query.scw
PDB file : Tito_Scwrl_5L6L.pdb: