Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMKKKQKQKLLNQFRPSLDGVRGQLFRSLEEESLRRYGLPLQVMLDPKNRQILTIGLAGKTNEDTRINVPIDDNFNTVLKRIRSGENGIFERFRDNLLIEIVSYWNDQRLKNDEPTAQAVATPVTEETVSVPEEKTEKPKADTTENTRSTDTNAALSFADFSKAVAEYPKFYTEQNEHEVVINEKNADEPRKLATISMTTENEFVIEKALERKYKVKLTLIPLIEQFAATAITDR
5GAI Chain:Y ((88-142))--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HSMAIYDANGSQVDYIANVLKYDPDQYSIEADKKFKYSVKLSDYPTLQDAASAAV---


General information:
TITO was launched using:
RESULT:

Template: 5GAI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain Y - contact count / total energy / energy per contact / energy per residue : 73 -5037 -68.99 -91.57
target 2D structure prediction score : 0.67
Monomeric hydrophicity matching model chain Y : 0.62

3D Compatibility (PKB) : -68.99
2D Compatibility (Sec. Struct. Predict.) : 0.67
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.278

(partial model without unconserved sides chains):
PDB file : Tito_5GAI.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5GAI-query.scw
PDB file : Tito_Scwrl_5GAI.pdb: