Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNRLKEKYLKEVTPSLMEKFNYSSVMQTPKVEKIVINMGVGDAVSNAKNLDKAVEELTLITGQKPMITKAKKSIAGFRLREGMPIGAKVTLRGERMYEFLDKLVSVSLPRVRDFHGVSKKAFDGRGNYTLGIKEQLIFPEVDYDLVDKVRGMDIVIVTTANSDEESRELLTQLGMPFQK
2ZJQ Chain:D ((3-179))--QLKTKYNDQVRPALMQQFGYSSVMAVPRIEKIVVNEGLGSSKEDSKAIDKAAKELALITLQKPIITKAKKSISNFKLRQGMPVGIKVTLRGERMYVFLEKLINIGLPRIRDFRGINPNAFDGRGNYNLGIKEQLIFPEITYDMVDKTRGMDITIVTTAKTDEEARALLQSMGLPFRK


General information:
TITO was launched using:
RESULT:

Template: 2ZJQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 773 -57383 -74.23 -324.19
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain D : 0.91

3D Compatibility (PKB) : -74.23
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.91
QMean score : 0.445

(partial model without unconserved sides chains):
PDB file : Tito_2ZJQ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2ZJQ-query.scw
PDB file : Tito_Scwrl_2ZJQ.pdb: