Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTQEIKKLPVIFLGLFFITVGLNWFLLPHDIASAGVGAIGHLVETAFSIQRSVTVWSINLMMLLLAAVLLGKSVFFKTVAGSLLFPVVLEIVPKVEMISSHFFSLI-SGSLLFSLGVYTLYTVGASNGGITIPPIIFHKFFRLPMPQGLLLTNSLIVFLNYYVFGLLETLFVLLSITVSSLFMKILIRLSPVSRKFE
2RIM Chain:A ((42-100))-------------------------------------------------------------------------------------------VPKSTIKTQHFFSLFHQGKVFFSLEVY-------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2RIM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 27 -6942 -257.09 -266.98
target 2D structure prediction score : 0.19
Monomeric hydrophicity matching model chain A : 0.39

3D Compatibility (PKB) : -257.09
2D Compatibility (Sec. Struct. Predict.) : 0.19
1D Compatibility (Hydrophobicity) : 0.39
QMean score : 0.204

(partial model without unconserved sides chains):
PDB file : Tito_2RIM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2RIM-query.scw
PDB file : Tito_Scwrl_2RIM.pdb: