Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSKGQTLQDPFLNSLRKERIPVSIFLVNGIKLQGHIESFDQYVVLLKNTVSQMVYKHAISTVVPARNPRPAGAQGAGFPAQGGSQGGFGGQGAGFGGAQGAGFGGQGGFGGQGGFGGQGGFGGQGGFGGQGGFGGQGGFGGHQGGFGGHQGGFDNDSKFEDGQDDENNR
3RER Chain:F ((5-65))----QSLQDPFLNALRRERVPVSIYLVNGIKLQGQIESFDQFVILLKNTVSQMVYKHAISTVVPS--------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3RER.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain F - contact count / total energy / energy per contact / energy per residue : 216 -45825 -212.15 -751.22
target 2D structure prediction score : 0.49
Monomeric hydrophicity matching model chain F : 0.73

3D Compatibility (PKB) : -212.15
2D Compatibility (Sec. Struct. Predict.) : 0.49
1D Compatibility (Hydrophobicity) : 0.73
QMean score : 0.524

(partial model without unconserved sides chains):
PDB file : Tito_3RER.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3RER-query.scw
PDB file : Tito_Scwrl_3RER.pdb: