Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGMWCTLCTSYTYQTNKKYIVFLGGHFKMAKEKFDRSKPHVNIGTIGHVDHGKTTLTAAITTVLSKKNGGQAMAYDQIDGAPEERERGITISTAHVE--------------YETD--------------TRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADG-PMPQTREHILLSRQVGVPYIVVFLNKVDMVDDEELLELVEMEVRDL--LTEYEFPGDDVPVVAGSALKALEGDASYEEKILELMAAVDEYIPTPERD-NDKPFMMPVEDVFSITGRGT--------VATGRVERGQVRVGDEVEVVGIAEETSKTTVTGVEMFRKLLDYAEAGDNIGALLRGVAREDIQRGQVLAKPGTITPHTKFSAEVYVLTKEEGGRHTPFFTNYRPQFYFRTTDVTGVVELPEGTEMVMPGDNVTMEVELIHPIAIENGTKFSIREGGRTVGAGVVTEIKA
3I1F Chain:B ((3-256))---------------------------------WPKVQPEVNIGVVGHVDHGKTTLVQAITGIWTSKHS-------------EELKRGMTIKLGYAETNIGVCESCKKPEAYVTEPSCKSCGSDDEPKFLRRISFIDAPGHEVLMATMLSGAALMDGAILVVAANEPFPQPQTREHFVALGIIGVKNLIIVQNKVDVVSKEEALS----QYRQIKQFTKGTW-AENVPIIPVSALHKINIDS--------LIEGIEEYIKTPYRDLSQKPVMLVIRS-FDVNKPGTQFNELKGGVIGGSIIQGLFKVDQEIKVL-----------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3I1F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1059 -39246 -37.06 -183.39
target 2D structure prediction score : 0.55
Monomeric hydrophicity matching model chain B : 0.67

3D Compatibility (PKB) : -37.06
2D Compatibility (Sec. Struct. Predict.) : 0.55
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.375

(partial model without unconserved sides chains):
PDB file : Tito_3I1F.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3I1F-query.scw
PDB file : Tito_Scwrl_3I1F.pdb: