Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAAKRTDELIPLCHPLPIYRADVEYELEHDFVKIIAAVETIGPTGVEMEALTAASLAGLTIYDMLKPHCEPEELWMDQCKLLKKKGGKSHFKRVLRQPVSAAVIVLSDTVAAGRKPDTAGKSVVETLTEAGFDPIHYQILPDEADDLKELVLELT--KSYACIMTVGGTGIGKRDITVDTLEPLLERKLDGLMEAARSFGQKRTPYAAMSRGVAGFIDRSLVVALPGSRGGASESMAAILPALVHIFDVCRDLPHPGGYE
3MCH Chain:B ((1-162))-------------------------------------------------------------------------------------------------MFRVGILTVSDKGFRGERQDTTHLAIREVLAGGPFEVAAYELVPDEPPMIKKVLRLWADREGLDLILTNGGTGLAPRDRTPEATRELLDREVPGLAELMRLVGLRKTPMAALSRGVAGVRGRTLILNLPGSPKGARESLEAVLPVLPHALSLVTGKPWKEGH-


General information:
TITO was launched using:
RESULT:

Template: 3MCH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 862 -29888 -34.67 -186.80
target 2D structure prediction score : 0.67
Monomeric hydrophicity matching model chain B : 0.69

3D Compatibility (PKB) : -34.67
2D Compatibility (Sec. Struct. Predict.) : 0.67
1D Compatibility (Hydrophobicity) : 0.69
QMean score : 0.522

(partial model without unconserved sides chains):
PDB file : Tito_3MCH.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3MCH-query.scw
PDB file : Tito_Scwrl_3MCH.pdb: