Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTQTSLSQSPNDTTSSQDVIEIKTVTRSVGRKATITKEELFQAALNLIGPQKSIASLSLREVAREAGIAPNSFYRHFKDIDELAISLIDRAGIVLRKIIRQARLRASLQDSIIRSSVEIFLQQLDADEGNLSLFLREGFTGSASYKAAVDRQLNFFQQELQEDLIRLERLNNN-HLYHPELVAKAITQLVFHMGAKVIDLPIDQRAEVAEQTMIMIRMILEGARHLDEAKIR
3WHC Chain:E ((4-193))--------------------------------KRPKYMQIIDAAVEVIA-ENGYHQSQVSKIAKQAGVADGTIYLYFKNKEDILISLFKEKMGQFIERMEEDIKEKATAKEKLALVISKHFSLLAGDHNLAIVTQLELRQSNLELRQKINEILKGYLNILDGILTEGIQSGEIKEGLDVRLARQMIFGTIDETVTTWVMNDQ--KYDLVALSNSVLELLVSGIHN-------


General information:
TITO was launched using:
RESULT:

Template: 3WHC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain E - contact count / total energy / energy per contact / energy per residue : 685 -74498 -108.76 -394.17
target 2D structure prediction score : 0.70
Monomeric hydrophicity matching model chain E : 0.67

3D Compatibility (PKB) : -108.76
2D Compatibility (Sec. Struct. Predict.) : 0.70
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.552

(partial model without unconserved sides chains):
PDB file : Tito_3WHC.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3WHC-query.scw
PDB file : Tito_Scwrl_3WHC.pdb: