Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSNLTLSQFL--QQEKGNLTPELAQVIDTIAATCKTIDQALQKGALAGILGSAGNENVQGETQKKLDVISNDYLIDALKVHPHVGGLASEELDDFTPAQ--ENGEYLVLFDPLDGSSNIDINMCVGTIFSILPAKNA-VTQAQDFMQAGTQQVAAGYVLYGPSTMMALTVGNGVAFFTLDPETQTFLLTTENVQVSADTQEFAINASNQRHWEQPVKQYIEELLAGKTSVREKDFNMRWVACMVGDVHRILCRGGIFLYPYDLKDPKKAGRLRLMYEANPMSMLIEQAGGASTTGRVRILEIEPTELHQRVPVIIGSKNEVERVTSYH
2F3B Chain:A ((11-332))--DVTLTRFVMEEGRKARGTGEMTQLLNSLCTAVKAISTAVRKAGIAHLYGIAGSTNVTGDQVKKLDVLSNDLVINVLKSSFATCVLVSEEDKNAIIVEPEKRGKYVVCFDPLDGSSNIDCLVSIGTIFGIYRKNSTDEPSEKDALQPGRNLVAAGYALYGSATMLVLAMVNGVNCFMLDPAIGEFILVDRDVKIKKKGSIYSINEGYAKEFDPAITEYIQRKKFP--PDNSAPYGARYVGSMVADVHRTLVYGGIFMYPANKK--SPKGKLRLLYECNPMAYVMEKAGGLATTGKEAVLDIVPTDIHQRAPIILGSPEDVTELLEIY


General information:
TITO was launched using:
RESULT:

Template: 2F3B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1887 55707 29.52 175.73
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain A : 0.84

3D Compatibility (PKB) : 29.52
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.84
QMean score : 0.448

(partial model without unconserved sides chains):
PDB file : Tito_2F3B.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2F3B-query.scw
PDB file : Tito_Scwrl_2F3B.pdb: