Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAKEHYDRSKPHVNIGTIGHVDHGKTTLTAAITTVLGKKGLANPQDYASIDAAPEERERGITINTAHVE--------------YETEK--------------RHYAHIDAPGHADYVKNMITGAAQMDGAILVVSATD-GPMPQTREHILLSRQVGVKYLIVFLNKVDLVDDEELIDLVEMEVRELLSEYGFPGDDTPVIKGSALKALQGDPDAEAAIMELMDTVDEYIPTPERD-TDKPLLLPVEDVFSITGRGT--------VASGRIDRGAVRVGDEVEIV-GIKPETQKAVVTGVEMFRKTLDYGEAGDNVGVLLRGIQRDDIERGQVLAKPGSITPHTKFKAEVYVLTKEEGGRHTPFFNNYRPQFYFRTTDVTGTITLPEDTEMVMPGDNVTIDVDLIHPIAVENGTTFSIREGGRTVGSGIVTEIEA
3I1F Chain:B ((3-267))-----WPKVQPEVNIGVVGHVDHGKTTLVQAITGIWTSK-------------HSEELKRGMTIKLGYAETNIGVCESCKKPEAYVTEPSCKSCGSDDEPKFLRRISFIDAPGHEVLMATMLSGAALMDGAILVVAANEPFPQPQTREHFVALGIIGVKNLIIVQNKVDVVSKEEALSQYR-QIKQFTK--GTWAENVPIIPVSALHKINID--------SLIEGIEEYIKTPYRDLSQKPVMLVIRS-FDVNKPGTQFNELKGGVIGGSIIQGLFKVDQEIKVLPGLRVEKQGKV-------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3I1F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1088 5147 4.73 22.77
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain B : 0.69

3D Compatibility (PKB) : 4.73
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.69
QMean score : 0.335

(partial model without unconserved sides chains):
PDB file : Tito_3I1F.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3I1F-query.scw
PDB file : Tito_Scwrl_3I1F.pdb: