Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLEKDIERILISQEEIQVRCKELGKELTEIYQNTN------PLV-VGVLKGAVPFMADIVRSIDTY---LELDFMDVSSYGNATVSSGEVKIVKDLDTNVEGRDLLIVEDIIDSGRTLAYLVDLFKYRKAKSVKIVTLLDKPEGRVVNIEADYVGFNVPNEFVVGYGLDYAEAYRNLPYIGVLKPSVYQSN
5K51 Chain:C ((19-198))--------VLFTEAELHTRMRGVAQRIADDYSNCNLKPLENPLVIVSVLKGSFVFTADMVRILGDFGVPTRVEFLR-------------------------GKHVLVLEDILDTALTLREVVDSLKKSEPASIKTLVAIDKPGGRKIPFTAEYVVADVPNVFVVGYGLDYDQSYREVRDVVILKPSVY---


General information:
TITO was launched using:
RESULT:

Template: 5K51.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 692 -21763 -31.45 -150.09
target 2D structure prediction score : 0.69
Monomeric hydrophicity matching model chain C : 0.78

3D Compatibility (PKB) : -31.45
2D Compatibility (Sec. Struct. Predict.) : 0.69
1D Compatibility (Hydrophobicity) : 0.78
QMean score : 0.470

(partial model without unconserved sides chains):
PDB file : Tito_5K51.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5K51-query.scw
PDB file : Tito_Scwrl_5K51.pdb: