Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLNVLKHFKEKQMPSFQSADAQINYQTFGEPSSPALVFSNSLGTNYGMWQKQFNELKDQFFVICYDNRGHGSSSTPDGPYTVEQLGEDVVRLLDHLNISKAAFCGISMGGLTGQWLAIHYPNRFSHVVVANTAAKIGQEQAWLDR--A-KLVRE---QGLQPIA----TTAASRWFTDPFIQ-SHPSIVNNLCNDLSAGSA--MGY--ANC------CEALAK--ADVREQLKDIKIPVLVIAGPQDPVTTVADGEFMQQRIPQSKLAEID-ASHISNVEQPEVFNKILKDFLVN
4K2A Chain:C ((6-287))-------------HHRAVLGSTMAYRETGRSDAPHVLFLHGNPTSSYIWRNIMPLVAPVGHCIAPDLIGYGQSGKPDISYRFFDQADYLDALIDELGIASAYLVAQDWGTALAFHLAARRPQLVRGLAFMEFIRPMRDWSDFHQHDAARETFRKFRTPGVGEAMILDNNAFVERVLPGSILRTLSEEEMAAYRAPFATRESRMPTLMLPRELPIAGEPADVTQALTAAHAALAASTYPKLLFVGSPGALVSPAFAAEFAKTLKHCAVIQLGAGGHYLQEDHPEAIGRSVAGWIAG


General information:
TITO was launched using:
RESULT:

Template: 4K2A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 1331 -80360 -60.38 -311.47
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain C : 0.68

3D Compatibility (PKB) : -60.38
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.68
QMean score : 0.507

(partial model without unconserved sides chains):
PDB file : Tito_4K2A.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4K2A-query.scw
PDB file : Tito_Scwrl_4K2A.pdb: