Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNKIVEVQNVTKVYGKNNEKKTQALSGISFDVEKGEFIGIMGASGSGKSTLLNILSTLDKPTDGHIRINQKDVTTLKGNQLADFRANEIGFIFQDFNLLESLTAQENIAVPLSLQGVRPKEIKQRVQKIAERLSISH-----ILESYPSEI-------SGGQKQRVAAARALITQPTILLGDEPTGALDSKSARDLLDTMDELNTKDHVSILLVTHDPFSASYCQRILFIKDGGIHQEVKRGDQSRDSFYREILSILGNLEQ
5L22 Chain:A ((332-543))----IELSNVVVV---PPEGKTPVLRNINMRILPGEFVAIIGPSGSGKSSLVRTILGIWLPVHGTVEIDGADLKQWDRDYFGKF----VGYLPQDIELFEG-TVAENIA--------RFGELDSEKIIEAAKLSGAHDVIIKLPDGYDTYIGPGGITLSGGQRQRIALARALYGNPRIVILDEPDSNLDEQGEQALYNALIELK-KRKVTTIIVSHRIRLLNLVDKIAIMQDG-----------------------------


General information:
TITO was launched using:
RESULT:

Template: 5L22.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 980 -26181 -26.72 -130.91
target 2D structure prediction score : 0.54
Monomeric hydrophicity matching model chain A : 0.75

3D Compatibility (PKB) : -26.72
2D Compatibility (Sec. Struct. Predict.) : 0.54
1D Compatibility (Hydrophobicity) : 0.75
QMean score : 0.392

(partial model without unconserved sides chains):
PDB file : Tito_5L22.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5L22-query.scw
PDB file : Tito_Scwrl_5L22.pdb: