Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMMSLHRYKGKYMSNKRIAIIGAGPAGLMAAEVLSQYAYEIDVF-EQKPSAARKFLMAGKTGLNISHAEPLPQFIERYDHTEWLKPWVEKWDAVWIQKWMKSLGIESYVGTSGRIFPVEMKAAPLLRAWLKRLAEQQVKFFYRHRCINLQGTTVTLENQNNQSTETFTQQYDAVILACGAVSWSQLGSDGAWQQWMDQSSIEPFQASNAGVLHTWSAFMESCFGEPLKRINAWVEPSQVTHGDIVITHYGLESGVIYKLGRALREQQKQGKSLNLFLDLLPDVELTQLVKKLQASKKQSLTNIWRKAGLDTAKINLIREVVD-------KALWSQPETMAQKMKALQIKLDGFRPIEEAISCAGGVKQDALTESLELKQTS--GVFCCGEMLDWDAPTGGYLLTACFATGRAAGEGVHSFLEK---
4NTC Chain:A ((2-326))-MSIGKLLSNGALLVDVLIIGAGPAGLSTATGLARQLHTAVVFDSGVYRNAKTQHMHNVLG---------------WDHR---------------------------------------NPAELRAAGRADLTTRYSTIQFQNSTIEAIRQVETNQLFEARDNEGHSWYGRKVVLATG-VRDIPLDIEGYSECWAN------------GIYHCLF-----CDG--------YEERGQETVGVLALGPIANPARALHLARMALR----LSESVTIYTN-----GNEQLAKEIQQAAEESPVG---ASGLKFEA-RPIRRFEKGDVAKTVIVHLGESESKTEGFLVYNPQTEVNGPFAKQLALNMTEGGDILTTP-PFYETSVPGVFAVG-----DCATPLKAVTPAVSMGSLAAGGLVAQLQAQAL


General information:
TITO was launched using:
RESULT:

Template: 4NTC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1780 -35195 -19.77 -112.80
target 2D structure prediction score : 0.44
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : -19.77
2D Compatibility (Sec. Struct. Predict.) : 0.44
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.202

(partial model without unconserved sides chains):
PDB file : Tito_4NTC.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4NTC-query.scw
PDB file : Tito_Scwrl_4NTC.pdb: