Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSKQILILAGDGIGPEIVGAAEKVLNKVNEKFNLSLTWEHGLLGGAAIDAHGEPYPAVTSEQAK-KADAILLGAVGGPKWDTIERSIRPERGLLKIRSELNLFANLRPAILYPQLADASSLKPEIVAGLDILIVRELTGGIYFGQPRGIRELENGEKQGYNTDVYSESEIKRIAKVAFELAGLR-----GGK--------VCSVDKANVLEVTE-LWKQTVTDLQQ--ANYPNIQLSHMYVDNAAMQLVRAPKQFDVIVTGNLFGDILSDEAAMLTGSIGMLPSASLDENGKGMYEPCHGSAPDIAGQNVANPLATILSVAMMLRYTFREEAAAKAIEDAVGQVLDQG-LRTADIMSEGMTKVGTAEMGEAVVAALA
3TY3 Chain:A ((15-364))------LIPADGIGKEVVPAARRLMENLPAKHKLKFDFIDLDAGWGTFERTGKALPERTVERLKTECNAALFGAVQSPTHKVAGYS----SPIVALRKKMGLYANVRPV----KSLDGAKGKP-----VDLVIVRENTECLYVKEERMVQNTP-GKRVAEAIRRISEEASTKIGKMAFEIAKSRQKIRESGTYSIHKKPLVTIIHKSNVMSVTDGLFRESCRHAQSLDPSYASINVDEQIVDSMVYRLFREPECFDVVVAPNLYGDILSDGAASLIGSLGLVPSANVGDNFV-MSEPVHGSAPDIAGRGIANPVATFRSVALMLEFMGHQDAAAD-IYTAVDKVLTEGKVLTPDLGG----KSGTNEITDAVLANI-


General information:
TITO was launched using:
RESULT:

Template: 3TY3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1796 -28689 -15.97 -86.41
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain A : 0.80

3D Compatibility (PKB) : -15.97
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.80
QMean score : 0.485

(partial model without unconserved sides chains):
PDB file : Tito_3TY3.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3TY3-query.scw
PDB file : Tito_Scwrl_3TY3.pdb: