Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MCRLRERTRMTQQDFRTKVDNTVFGVRATALIVQNHKLLVTKD----KGKYYTIGGAIQVNEKTEDAVVREVREELGVKAQAGQLAFVVENRFEVDG----VSYHNIEFHYLVDLLEDAPL-TMQEDEKSQPCEWIDLDKLEDIQLVPAFLKTALPDWEGQLRHIHLEE-
2R5W Chain:A ((6-349))MYDISVFIGRFQPFHKGHLHNIIIALQNSKKVIINIGSCFNTPNIKNPFSFEQRKQMIESDLQVAGIDLDTVVIEPLADYFYQEQKWQDELRKNVYKHAKNNNSIAIVGHIKDSSSYYIRSFPEWDYIGVDNYKNFNATEFRQKFYNGIISKQYMCSNDPKLGTYNFLTKFMDTQVYQDLVAENNYVIEYKRLWLKAPFKPNFVTVDALVIVNDHILMVQRKAHPGKDLWALPGGFLECDETIAQAIIRELFEETNINLTHEQLAIAKRCEKVFDYPDRSVRGRTISHVGLFVFDQWPSLPEINAADDAKDVKWISLGSNIKNICDRMLE-----DHYQIITILLEECG


General information:
TITO was launched using:
RESULT:

Template: 2R5W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 658 8496 12.91 54.81
target 2D structure prediction score : 0.49
Monomeric hydrophicity matching model chain A : 0.57

3D Compatibility (PKB) : 12.91
2D Compatibility (Sec. Struct. Predict.) : 0.49
1D Compatibility (Hydrophobicity) : 0.57
QMean score : 0.404

(partial model without unconserved sides chains):
PDB file : Tito_2R5W.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2R5W-query.scw
PDB file : Tito_Scwrl_2R5W.pdb: