Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTVQMEYEKDVKVAALDG-KKIAVIGYGSQGHAHAQNLRDS------GRDVIIGVRPGKSF-DKAKEDGFDT----Y-TVAEATKLADVIMILAPDEIQQELYEAEIAPNLEAGNAVGFAHGFNIHFEFI--KVP-ADVDVFMCAPKGPGHLVRRTYEEG-----FGVPALYAVYQDATGNAKNIAMDWCKGVGAARVGLLETTYKEETEEDLFGEQAVLCGGLTALIEAGFEVLTEAGYAPELAYFEVLHEMKL-IVDLIYEGGFKKMRQSISNTAEYGDYVSGPRVITEQVK---ENMKAVLADIQNGKFANDFVNDYK-----AGRPKLTAYREQAANLEIEKVGAELRKAMPFVGKNDDDAFKIYN
3FR8 Chain:B ((49-394))-------------EAFKGIKQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKIGLRKGSKSFDEARAAGFTEESGTLGDIWETVSGSDLVLLLISDAAQADNYE-KIFSHMKPNSILGLSHGFLLGHLQSAGLDFPKNISVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATDVALGWSVALGSP--FTFATTLEQEYKSDIFGERGILLGAVHGIVEALFRRYTEQGMDEEMAYKNTVEGITGIISKTISKKGMLEVY--NSLTEE-GKKEFNKA-YSASFYPCMDILYECYEDVASGSEIRSVVLAGRRFYEKEGLPAFP--MGNIDQTRMWKVGEKVRSTRPENDLGPLHPFTA--


General information:
TITO was launched using:
RESULT:

Template: 3FR8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1401 49591 35.40 156.93
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain B : 0.71

3D Compatibility (PKB) : 35.40
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.71
QMean score : 0.412

(partial model without unconserved sides chains):
PDB file : Tito_3FR8.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3FR8-query.scw
PDB file : Tito_Scwrl_3FR8.pdb: