Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQDTPLIIGSRSFQSRLLVGTGKYKDLNETDLAIQASGAEIVT----VAIRRVNIGQNPDQPNLLSVIPPEKYTILPNTAGCFD---ADSAVRTCMLARALLDGHNLVKLEVLGDEKTLYPNVTETLKAARTLIDDGFEIMVYTSDDPIIAQELESMGCVAI--MPLGSLIGSGLGIL--NPHTISIIKENA-----KVPVLVDAGVGTASDAAIAMELGCDGVLMNTAIAAAQNPILMASAMKKAVEAGREAFLAGRMPRKRMANASSPETGYFFK
1W0M Chain:G ((2-223))-RLPILIINFKAYGE--AAGKRAVELAKAAERAARELGVNIVVAPNHLELGLVSQS--VDIPVYAQGADVEAG-------GAHTAHVSLENIKEAGGSGVIL-NHSEAPLK--------LNDLARLVAKAK---SLGLDVVV-CAPDPRTSLAAAALGPHAVAVEPP-ELIGTGRAVSRYKPEAIVETVGLVSRHFPEVSVITGAGIESGDDVAAALRLGTRGVLLASAAVKAKDPYAKIVELAKPLS-----------------------------


General information:
TITO was launched using:
RESULT:

Template: 1W0M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain G - contact count / total energy / energy per contact / energy per residue : 1220 -16149 -13.24 -78.39
target 2D structure prediction score : 0.51
Monomeric hydrophicity matching model chain G : 0.67

3D Compatibility (PKB) : -13.24
2D Compatibility (Sec. Struct. Predict.) : 0.51
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.320

(partial model without unconserved sides chains):
PDB file : Tito_1W0M.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1W0M-query.scw
PDB file : Tito_Scwrl_1W0M.pdb: