Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSKGQTLQDPFLNSLRKERIPVSIFLVNGIKLQGHIESFDQYVVLLKNTVSQMVYKHAISTVVPARNPRPAGAQGAGFPAQGGSQGGFGGQGAGFGGAQGAGFGGQGGFGGQGGFGGQGGFGGQGGFGGQGGFGGQGGFGGHQGGFGGHQGGFDNDSKFEDGQDDENNR
3QO3 Chain:D ((5-65))----QSLQDPFLNALRRERVPVSIYLVNGIKLQGQIESFDQFVILLKNTVSQMVYKHAISTVVPS--------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3QO3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 216 -46890 -217.08 -768.69
target 2D structure prediction score : 0.46
Monomeric hydrophicity matching model chain D : 0.73

3D Compatibility (PKB) : -217.08
2D Compatibility (Sec. Struct. Predict.) : 0.46
1D Compatibility (Hydrophobicity) : 0.73
QMean score : 0.533

(partial model without unconserved sides chains):
PDB file : Tito_3QO3.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3QO3-query.scw
PDB file : Tito_Scwrl_3QO3.pdb: