Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGHSVALNFADGKTFFISVNKDELLLDAAVRQGINLPLDCREGVCGTCQGQCETGIYEQEYVDEDALSERDLAERKMLACQTRVKSDAAFYFDHDSAICNAGDTLKIETQVTAVELVSETTAILHLDASNHAEQLQFLPGQYARLQIPDT-------------------------------EDWRSYSFANRPNATNQLQFLIRL---------LPDGVMSNYLRDRCQVGQSLLIEAPLGSFYLREVERPLVFVAGGTGLSAFLGMLDNLVEQP-NSPTVQFYYGVNSETDLCEQQRLHAYAEQLPNFSYHPIVTKAT--ETWQGKAGYIHEHLNKDQ-L---AEQAFDMYLCGPPPMIEAVKNWLDEQALQNYRIYSEKFLQSNTSR
4U9U Chain:A ((3-281))-------------------------------------------------------------------------------------------------------VKKWECTVISNDNKATFIKELKLAIPDG-ESVPFRAGGYIQIEAPAHHVKYADFDVPEKYRGDWDKFNLFRYESKVDEPIIRAYSMANYPEEFGIIMLNVRIATPPPNNPNVPPGQMSSYIWS-LKAGDKCTISGPFGEFFAKDTDAEMVFIGGGAGMAPMRSHIFDQLKRLKSKRKMSYWYGARSKREMFYVEDFDGLAAENDNFVWHCALSDPQPEDNWTGYTGFIHNVLYENYLKDHEAPEDCEYYMCGPPMMNAAVINMLKNLGVEEENILLDDFGG-----


General information:
TITO was launched using:
RESULT:

Template: 4U9U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1185 -15694 -13.24 -67.64
target 2D structure prediction score : 0.55
Monomeric hydrophicity matching model chain A : 0.68

3D Compatibility (PKB) : -13.24
2D Compatibility (Sec. Struct. Predict.) : 0.55
1D Compatibility (Hydrophobicity) : 0.68
QMean score : 0.510

(partial model without unconserved sides chains):
PDB file : Tito_4U9U.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4U9U-query.scw
PDB file : Tito_Scwrl_4U9U.pdb: